HPC::Runner::Command::Plugin::Logger::Sqlite; Base class for HPC::Runner::Command::submit_jobs::Plugin::Logger::Sqlite and HPC::Runner::Command::execute_job::Plugin::Sqlite Attributes schema Sqlite3 Schema Object db_file Path to sqlite3 db file. If the file doesn't exist sqlite3 will create it. submission_id This is the ID for the entire hpcrunner.pl submit_jobs submission, not the individual scheduler IDs Subroutines NAME HPC::Runner::Command::Plugin::Sqlite - Log HPC::Runner workflows to a sqlite DB. SYNOPSIS To submit jobs to a cluster hpcrunner.pl submit_jobs --hpc_plugins Logger::Sqlite To execute jobs on a single node hpcrunner.pl execute_jobs --job_plugins Logger::Sqlite Generate a summary report hpcrunner.pl stats hpcrunner.pl stats --jobname gatk hpcrunner.pl stats --project Sequencing1 hpcrunner.pl stats --project Sequencing1 --jobname gatk_haplotypecaller Generate a longer report hpcrunner.pl stats hpcrunner.pl stats --long/-l --jobname gatk hpcrunner.pl stats --long/-l --project Sequencing1 hpcrunner.pl stats --long/-l --project Sequencing1 --jobname gatk_haplotypecaller DESCRIPTION HPC::Runner::Command::Plugin::Sqlite - Log HPC::Runner workflows to a sqlite DB. This plugin requires sqlite3 in the path. AUTHOR Jillian Rowe COPYRIGHT Copyright 2016- Jillian Rowe LICENSE This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. SEE ALSO